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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909212.1_cds_XP_016459438.1_52966
CDS Infomation

[gene=LOC107782996] [db_xref=GeneID:107782996] [protein=histone deacetylase HDT1-like isoform X2] [protein_id=XP_016459438.1] [location=complement(join(64029..64092,64166..64292,64555..64645,64736..64786,65493..65608,65733..65771,65850..65866,65985..66202,66306..66376,67699..67711))] [gbkey=CDS]
Sequence

ATGGAATTCTGGGGTGCTGAGGTGAAAAGTGGACAACCTTTAACTGTACAACCCGGGGAT
GATATGGTTTTGCATCTTTCACAGGCATCTCTTGGTGAGGCAAAAAAGGATAAAGGATCA
GAACCTGTATGCTTGTCTGTGAATGTTGATGGCAAGAAACTTGCTCTTGGAACACTAAAC
TTAGATAAGCTGCCTCAACAACAATTTGACCTAGTTTTTGATAGAGACTTTGAACTATCA
CACAACTGGAAAAATGGTAGTGTCTACTTCTTTGGATACAAGGCAGCTAACCCATACGAG
CAGGAGGAAGATGAAGATGAGTCTGATGAGGAAATACCCCTTACTCTTGCCAACACTGGT
AAGCAGAAGGTGAAGATTGCGGAACCTAGTAAAGATGCAAAGGCGGATGATGAAGATGAT
AGCAGTGATGAAGATGATACGTCTGAGGATGAAGAAGATTCTGAGATGGGGGAGGATGAA
GATGATAGTGATGAAGATCAATCTGATGAGGAGACACCAAAGAAGGCTGAGCCTAGCAAA
AAGCGACCATCAGATTCAGCTATAAAAACTCCTGCACCCGATAAAAAGGCAAAATTTGCA
ACACCTCAAAAGACTGATGGTAAGAAAGGTGCTGTCCATGTGGCAACGCCTCACCCCTCA
AAACAGGCTGGTAAGACTTCTGGAAACAAGTCAAACCAGACTCCAAAATCTGGCGGATCT
CTTGCCTGCAAGACGTGCAGCAGGACTTTTGGTTCTGAAACTGCTCTGGAATCTCACTCA
AAAGCTAAGCATAGTGTCGGGAAGTAA

Peptide Sequence

PEP ID

XP_016459438.1
PEP Infomation

PREDICTED: histone deacetylase HDT1-like isoform X2 [Nicotiana tabacum]
Sequence

MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN
LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQEEDEDESDEEIPLTLANTG
KQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMGEDEDDSDEDQSDEETPKKAEPSK
KRPSDSAIKTPAPDKKAKFATPQKTDGKKGAVHVATPHPSKQAGKTSGNKSNQTPKSGGS
LACKTCSRTFGSETALESHSKAKHSVGK

Transcript Sequence

Gene sequence data has not been registered.